CCAT:   Combinatorial Code Analysis Tool
is a software package for predicting genome-wide co-binding between biological regulators such as Transcription factors (TFs). The CCAT package also includes accompanying tools to cluster similar Position weight matrix (PWMs) of different TFs into clusters; and search PWMs on multiple genome alignments for conserved motif instances.
CAUTION:: Currently, we only have searchable datasets related with fruitfly D.melanogaster. But human datasets are coming later.